Class Head: Dr. L.J. Farrugia
Course Documentation
Title: Atoms, Molecules and Moles - the Chemists' Toolkit Duration: 11 hours (lectures/workshops) Lecturer: Dr. Kenneth C. Campbell Aims: To consider the fundamental building units of matter - atoms, molecules and ions, and the mole concept as a convenient measuring standard. Objectives: Understand the classification of matter into elements, compounds and mixtures and be familiar with the physical states of matter. Understand the use of chemical symbols to represent atoms, molecules and ions, and the use of formulae in chemical equations. Use the concept of the MOLE as a counting unit for molecules, etc. and to apply it to determining relative reacting masses of substances taking part as reactants, or being formed as products in chemical reactions. Know the common types of chemical reactions in aqueous solutions. Know how to express the concentration of a solution, and be able to use numerical values of concentration in titrimetric analysis. Use the ideal gas equation, PV = nRT in calculations Outline: To investigate states of matter and chemical interactions in the context of chemical structure at a molecular level. These topics are broadly covered in Chang, Chapters 1-5 Title: The Elements and the Periodic Table Duration: 14 hours (lectures/workshops) Lecturers: Drs. Diane Stirling and Ronald J. Cross Aims: To review elements and their compounds, their occurrence and importance. To look for generalisations about behaviour and properties of elements using the Periodic Table. To discuss ionic and covalent bonding in compounds, and relate this to the position of the elements involved and to chemical reactivity. Objectives: Know the names and symbols for elements of groups 1, 2, 12, 13, 14, 15, 16, 17, and 18, and of the first transition series (Sc-Cu): know the names and formulae of the ions NH4+, NO3-, CO32-, SO42-, OH-, and CN-. Understand the concept of oxidation levels of the elements above when in their common compounds, and be able to derive them. Be able to derive the electronic configuration of the elements and the ions formed from them. Know the basis of the periodic table in terms of electronic structures of the atoms: be able to use the periodic table to rationalise or predict the properties of elements and compounds: know which elements are metals, semi-metals and non-metals. Know how ionisation energy, electron affinity, and electronegativity of elements vary across the periodic table. Understand how sharing pairs of electrons can lead to single, double or triple covalent bonds between atoms: that sharing electron-pairs between atoms of different electronegativity can lead to polar covalent bonds: in the limiting case, transfer of electrons from one element to another can lead to ionic bonds. Be able to relate the position of constituent elements of simple compounds to the type of bonding (ionic, covalent or metallic) encountered. Understand how the properties and structures of compounds are dependent on the types of bonding involved. Be able to derive the structures of simple covalent molecules. Be able to write Lewis structures for covalent molecules. Know the common properties of simple, binary molecules (e. g. chlorides, oxides, hydrides). Be able to balance redox equations. Outline: After an initial survey of the Periodic Table, the electronic structure of atoms will be presented and related to each element's position. The relationship of element position to the nature and bonding of the compounds it forms will then be described. These topics are broadly covered in Chang, chapters 7, 8, and 9. Title: Metals & their Compounds: Complexes and Corrosion Duration: 10 hours (Lectures & worshops) Lecturer: Dr. Louis J. Farrugia Aims: To consider the chemistry of the metallic elements, with emphasis on their reactivity in relation to their position in the Periodic Table, and their corrosion processes. To understand the concept of coordination chemistry and how it results in diverse behaviour of metal ions. Objectives: Know where metals, semi-metals and non-metals occur in the Periodic Table List the characteristic properties of metals and non-metals Understand what is meant by coordination number and unit cell Draw the structures of some metals and simple ionic compounds in terms of FCC, BCC or HCP unit cells. Appreciate close packing, octahedral and tetrahedral holes Understand the chemical processes involved in the corrosion of metals, and understand how corrosion can be prevented. Write down the first row transition series elements and know their common oxidation states. Be able to determine the oxidation state of transition metals in their complexes. Define coordinate bond, coordination compound complex ion, chelation compound, ligand, polydentate ligand, geometrical isomers. Understand the concepts of Lewis acids and Lewis bases as applied to metal complexes, and appreciate the hard/soft acid/base concept. Be able to clearly identify Lewis acids and Lewis bases and hard and soft acids and bases. Outline: The position of metals in the Periodic Table, and their physical and chemical properties. Concepts of close packing, oxidation and reduction and coordination complexes. These topics are covered in Chang Chapters 8.6, 11.4 - 11.6, 16.8 - 16.10, 18.1 - 18.3 & 20.7 Title: How Fast and How Far ?: Chemical Kinetics and Equilibrium Duration: 14 hours (lectures/workshops/prelects) Lecturer: Drs. Malcolm Kadodwala & Ken Muir Aims: To consider the various factors that determine how fast and how far chemical reactions may go - basic kinetics and equilibrium thermodynamics, and their applications. Objectives: Explain in simple molecular terms why the rate of a reaction may depend on physical factors such as size, shape, form, and temperature of the reactants. Write down expressions showing how the rates of chemical reactions might depend on concentrations of reactants, and define what is meant by a "rate constant". Understand and use exponential/logarithmic forms of first order rate equations. Know what is meant by higher order kinetics, rate determining step (but equations not required.) Describe concepts such as "reaction coordinate", "transition states", and "activation energy", and use the Arrhenius equation to relate rate constants to temperature. Define catalysis and explain the various ways it might come about (surface, acid, base, enzymes). Describe possible mechanisms of chain reactions, explosions, etc. Explain why reactions eventually stop (reach equilibrium) and appreciate that, in the real world, most things have not yet reached equilibrium. Define reaction quotient, Q, and equilibrium constant, K. Show how K follows from consideration of dynamic, steady-state equilibrium. Use Q and K to predict in which direction a reaction may proceed, and what the final equilibrium concentrations might be. Understand how Q and K may be expressed alternatively as "Gibbs free energy change", DG = DGO + RTlnQ , and DGO = - RTlnK. Understand the relative roles of enthalpy (DH) and entropy (DS) of reaction in determining DG (= DH - T.DS), and use this to calculate effects of temperature on equilibrium. Appreciate the connection between DG and work, and know what is meant by the first and second laws of thermodynamics. Explain in simple molecular terms why the rate of a reaction may depend on physical factors such as size, shape, form, and temperature of the reactants. Outline: Starting from simple molecular and everyday concepts, the various factors that control how fast chemical reactions may go (kinetics) and how far they may go before reaching equilibrium (thermodynamics) will be considered. Covered in Chang Chapters 15, 19 & 21. Title: Aqueous Solutions Duration: 10 hours (lectures/workshops) Lecturer: Dr. J. Kelvin Tyler Aims: To consider the general nature of aqueous solutions of all types and to introduce simple quantitative ideas for some of their properties. Objectives: Appreciate the special nature of water as a solvent, its polarity, and its ability to 'solvate' molecules and ions. Learn about hydrogen bonding and its great significance in nature. Be able to distinguish electrolytes from non-electrolytes in aqueous solution through conductivities and number of particles. Understand the significance of the van't Hoff i factor. Understand the function of membranes and the origin of osmotic pressure. Be able to do simple calculations with P = icRT. Appreciate the nature and stabilities of colloidal solutions in terms of particle sizes and charges. Be familiar with the qualitative and simple quantitative aspects of ionic equilibria in aqueous media. These include concepts of acids and bases, hydrogen ion concentrations, pH and its measurement. Also, weak acids/bases and their salts, water as an electrolyte, Ka, Kb, Kw and pKa, etc., buffer solutions, acid-base titration curves, the use of pH indicators. Be able to handle simple calculations of pH, etc. for acid/base systems. Appreciate how the extent of protonation of species in solution varies wth pH. Understand simple concepts relating to solubility such as, pH dependence for weak acids and bases, and the solubility product. Outline: To highlight the unique nature of water as a solvent and to consider some of the special properties of aqueous solutions and their general significance in nature. To introduce ideas relating to electrolytes in solution, membranes and osmotic pressure, colloidal solutions, acid-base phenomena, and the solubilities of substances in water. Simple quantitative treatments will be given when appropriate. Covered in Chang , Chapters 16 & 1 Title: Carbon Compounds-I Duration: 14 hours (lectures/workshops) Lecturer: Dr. John Carnduff Aims: to discuss the distinctive characteristics, structures, shapes, naming, reactions, applications and natural occurrence of organic molecules and to interpret their reactions and bonding using general principles Objectives: Appreciate the unique ability of carbon to form elaborate molecules (many of which are found in living things), the nature of the covalent bond and the limitations on bond angles and lengths Understand the importance of charge and polarity in determining properties, solubility, intermolecular interactions and chromatography Draw molecules using various conventions and interpret molecular models Understand structural isomers, geometric isomers and chirality and appreciate the importance of lone pairs for shape and reactivity; understand the concept of nucleophiles and electrophiles Know the sources, uses and nomenclature of alkanes Understand what is meant by "functional groups"; recognise functional groups and correlate these with names of types of compound and of single compounds Understand the structure of alkenes, know examples of additions reactions and their use in industrial synthesis, understand the addition-polymerisation of alkenes and know some examples of such polymers Understand the inertness and uses of polyhalogen compounds Know examples of important alcohols and relate structures to water solubility. Understand the oxidation and metabolism of alcohols leading to aldehydes, ketones, acids and carbon dioxide Understand the structure and hydrolysis of esters and fats Know the applications of various alcohols, esters, ketones, acids, etc. and predict products of reactions of alcohols, esters, ketones and acids and devise syntheses Appreciate the uses of phosphate and sulphate esters and understand the mode of action of detergents and their biodegradation Outline: Carbon and its compounds, natural and synthetic. Alkanes, isomers, naming, fuels, lubricants, cracking. Alkenes, polymers, unsaturated fats, addition reactions, Halogen compounds. Alcohols, oxidation to acids, vinegar, esters, detergents. Covered ( only partially) in Chang Chapter 13. Title: Carbon Compounds-2 Polymers & the basis of Life Duration: 10 hours (lectures/workshops) Lecturer(s): Dr. David D. MacNicol Aims: To consider the chemistry of some more complex organic molecules and polymers and their uses and to illustrate how their properties depend on their structures and electron distributions. Objectives: Understand the relationship between amines and ammonia, the naming of amines and their basicity. Illustrate the importance of lone pairs for the hydrogen bonding, basicity and shape of amines. Appreciate the factors involved in drug transport. Identify imines including oximes, semicarbazones, etc.); understand their formation from carbonyl compounds and their importance in certain biological reactions. Write the structures of several aminoacids. Understand the formation of zwitterions and the meaning of 'isoelectronic point'. Select reagents for synthesis of amides and predict the products of hydrolysis of amides. Write the structures of some anaesthetics and explain how they act. Understand the water solubility, shape, neutrality and biological role of urea. Give experimental evidence for delocalisation in amides. Appreciate the importance of chirality; draw enantiomers; identify asymmetric centres; understand the terms: optical resolution, racemate and racemisation. Understand the nature and preparation of various linear and cross linked condensation polymers. Explain what is meant by the primary structure of proteins and identify peptide linkages and chiral centres. Understand (in simple terms) how enzymes operate and explain the role of sidechain functional groups. Draw chair conformations of a and b glucose. Understand the formation of polysaccharides and the effect of stereochemistry on water solubility and biodegradability. State clearly the experimental evidence for delocalisation of electrons in benzene. Know that substitution reactions of benzenes and subsequent modifications can lead to a variety of substituted benzenes (e.g. -NO2, -SO3H, -NH2, -SO2NH2). Understand the acidity and reactions of phenols. Understand the mode of action of certain sulphonamide drugs. Appreciate why certain organic molecules are coloured, define the term chromophore and give examples. Give examples of dyes and their use. Outline: This part of the organic element of the course is designed to illustrate how the chemical functionality controls the molecular properties. Examples range from drug transport to the properties of amino acids. Covered (only partially) in Chang Chapter 14